COLLECTION

Resources for Malaria Molecular Surveillance

TRAININGS

Educational materials and training platforms

Malaria-specific trainings

From Data to Insight – A Practical Introduction to Interpreting Malaria Genetics for Surveillance

PlasmoGenEpi

Introduction to Bioinformatics Analysis of Plasmodium Falciparum Genome data

University of Cape Town (UCT)

Introduction to Bioinformatics for Malaria Molecular Surveillance

Institute of Tropical Medicine (ITM) Antwerp

Introduction to Genetic Report Card Data Analysis and Genetic Epidemiology Mapping

MalariaGEN Resource Centre, Sanger Institute

Introduction to Plasmodium Genomics

Nottingham Trent University (NTU)

Malaria Molecular Surveillance Study Design workshop

Imperial College London

MalariaX: Defeating Malaria from the Genes to the Globe

Harvard University

Tracking the spread of An. stephensi in the Horn of Africa: A molecular approach

World Health Organization (WHO)

Training course in data analysis for genomic surveillance of African malaria vectors (MalariaGEN/PAMCA)

Pan-African Mosquito Control Association (PAMCA), MalariaGEN Resource Centre, Sanger Institute

Other trainings of interest

African Genomic Medicine Training Initiative (AGMT)

H3ABioNet

Arthropod Genomics Symposium: Pre-Symposium Workshop

Eukaryotic Pathogen, Vector and Host Informatics Resource (VEuPathDB)

Bioinformatics for Biologists: Analysing and Interpreting Genomics Datasets

Wellcome Connecting Science

GenEpi-BioTrain – Training Materials on Genomic Epidemiology and Public Health Bioinformatics

European Centre for Disease Prevention and Control (ECDC)

Genome bioinformatics: from short- to long-read sequencing

European Molecular Biology Laboratory (EMBL)

Genomic Epidemiology Learning Center

CZ GEN EPI

* Available through the Rapid Response Pathogen Genomics Training and Support Resources platform 

Introduction to Genomics

Wellcome Trust Biomedical Informatics Hub, University of Exeter

Introduction to Reviewing Genomic Research

The Global Health Network (TGHN)

JHU / NCDC Sequencing Workshop

Johns Hopkins University

Methods in genomic variant calling

European Molecular Biology Laboratory (EMBL)

Next Generation Sequencing Technologies: Principles and Applications

University of Malaya

NGS Academy – Africa CDC Pathogen Genomics Initiative

University of Cape Town (UCT), Africa Centres for Disease Control and Prevention (Africa CDC)

NGS - Quality control, Alignment, Visualisation

Swiss Institute of Bioinformatics (SIB)

NGS - Genome variant analysis

Swiss Institute of Bioinformatics (SIB)

Reproduce a genomics paper figure: step by step tutorial

CHATOMICS

Train the Trainer: Design Genomics and Bioinformatics Training

Wellcome Connecting Science

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