A universal malaria T cell vaccine based on HLA-E presentation

Malaria-specific CD8+ T cells have long been known to control the liver stages of malaria. We recently showed that they can also kill reticulocytes infected with Plasmodium vivax. However, the T cell targeted antigens presented by major histocompatibility complex (MHC) class I molecules on parasite-infected cells at any stage are largely unknown; a lack of knowledge that has hampered the development of rationally designed, T cell- based vaccines for malaria. Preliminary experiments determined the MHC-I peptidome presented on P. vivax-infected reticulocytes. This analysis revealed that many MHC-I-bound peptides are derived from abundant house-keeping proteins such as histones and ribosomal proteins that are highly conserved among Plasmodium species—targets not represented in current vaccine strategies. This discovery thus creates the unique opportunity to develop pan-Plasmodium vaccines eliciting T cells to validated targets. Unexpectedly, several peptides were identified in multiple donors regardless of their MHC-haplotype and our preliminary data show this is in part due to peptide presentation on MHC-E, a non-polymorphic MHC-Ib molecule. Therefore the hypothesis is that the MHC-E-restricted CD8+ T cells contribute to T cell-mediated protection against malaria and that this can be exploited for vaccine design using cytomegalovirus (CMV)-based vectors, the only platform that can be programmed to elicit MHC-E-restricted CD8+ T cell responses to inserted antigens.

This hypothesis will be tested in three specific aims using the P. cynomolgi non-human primate model of P. vivax with validation in human P. vivax-infected samples: In Aim 1 we will determine the relative contribution of MHC-E to presentation of P.vivax peptides to CD8+ T cells and investigate a possible role of MHC-E-targeting in CD8+ T cell killing of infected reticulocytes (iRetics). In Aim 2 the role of individual P. vivax antigens in MHC-E-restricted CD8+ T cell targeting of iRetics will be characterized. This will be accomplished by identifying MHC- E/peptide-specific T cell receptors and examining the ability of TCR-transfected T cells to target iRetics . In addition, the project will similarly characterize MHC-E-restricted CD8+ T cells elicited to selected antigens in rhesus macaques immunized with genetically modified rhesus cytomegalovirus vectors (RhCMV) that elicit exclusively MHC-E-restricted CD8+ T cells. In Aim 3, the project will compare RhCMV-based P. vivax vaccines eliciting MHC-E or MHC-Ia-restricted responses to selected, conserved antigens with respect to their ability to protect against P. cynomolgi challenge in rhesus macaques. Specifically, protection against the liver stage, primary blood stage and relapsing blood stage resulting from dormant liver stages will be monitored. This collaborative program brings together diverse expertise and, if successful, will provide a highly innovative approach to malaria vaccine development that is expected to have a lasting impact on vaccine research.

Project details

Vaccines

May 2022 — Apr 2027

$752,069

United States

Towards a vaccine for Plasmodium vivax