Last Updated: 06/09/2024

NOMADS II: Expanding nanopore sequencing of malaria

Objectives

The main objectives of this project are:

  1. Integrate nanopore sequencing into routine surveillance in Zambia;
  2. Expand nanopore sequencing to new geographies through collaboration and capacity building; and
  3. Optimize existing and develop novel nanopore sequencing assays for malaria molecular surveillance.
Principal Institution

PATH, United States

Principal Investigators / Focal Persons

Daniel Bridges
Mulenga Mwenda-Chimfwembe

Partner Investigators

Busiku Hamainza
Jason A. Hendry

Rationale and Abstract

With support from the Bill and Melinda Gates Foundation (BMGF), the NMEC Oxford Malaria Amplicon Drug-resistance Sequencing (NOMADS) team developed a cost-effective and scalable testing material (known as an assay) for antimalarial drug resistance in P. falciparum that uses a technique called nanopore sequencing. When the team tested the assay at the Zambian Ministry of Health’s National Malaria Elimination Centre (NMEC), they demonstrated that rapid in-country sequencing to identify antimalarial drug resistance was not only possible, but also required minimal infrastructure, allowing for the detection of drug resistance to happen closer to where policies and decisions are made. 

Project Outputs

NOMADS Community

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